5-Nitroisatin, also known as 5-nitroindigo in English, has a CAS number of 611-09-6, a molecular formula of C8H4N2O4, and a molecular weight ranging from 192.1284 to 192.13. It typically appears as an orange to yellow crystalline powder. There are significant differences in solubility in different solvents. In strongly acidic media such as concentrated sulfuric acid, a brownish black solution can be formed; The solubility in other common organic solvents needs to be verified through experiments. This solubility characteristic has a significant impact on the design of its synthesis route and purification process. For example, in the preparation process, it is necessary to choose a suitable solvent system to achieve efficient dissolution and separation. As an important pharmaceutical intermediate, it has a wide range of applications in the field of drug synthesis, such as the synthesis of active compounds such as antibacterial, antifungal, anti mycobacterial, anti spasmodic, human glutamine transferase inhibitors, deworming, anti HIV, anti tuberculosis, and acetylcholinesterase inhibitors.

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Chemical Formula |
C8H4N2O4 |
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Exact Mass |
192 |
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Molecular Weight |
192 |
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m/z |
192 (100.0%), 193 (8.7%) |
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Elemental Analysis |
C, 50.01; H, 2.10; N, 14.58; O, 33.31 |
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Chemical Properties
5-Nitroisatin is a solid at room temperature, with a melting point of approximately 251°C (decomposition). Its predicted boiling point is around 407.64°C, and its density is estimated to be approximately 1.6 g/cm³. The compound is relatively stable under standard conditions but may decompose at elevated temperatures or in the presence of strong acids or bases. Its solubility in water is low, but it can dissolve in organic solvents such as ethanol, dimethylformamide (DMF), and chloroform, which facilitates its use in various chemical reactions.
The structure of 5-Nitroisatin consists of an indole ring system with a carbonyl group (C=O) at positions 2 and 3, and a nitro group at position 5. This arrangement of functional groups gives rise to its characteristic reactivity, enabling it to participate in a wide range of chemical transformations, including nucleophilic substitution, condensation, and cyclization reactions.

5-Nitroisatin (CAS number 611-09-6) is an important organic synthetic intermediate, chemically named 5-nitro-2,3indoledione. Its unique molecular structure has demonstrated extensive application potential in various fields such as medicine, chemical engineering, and dyes.
In the field of drug synthesis
1. Antibacterial and antifungal drugs
5-nitroindigo and its derivatives have shown significant potential in the synthesis of antibacterial and antifungal drugs. Through structural modification, active molecules targeting specific pathogens can be designed. For example, its nitro group can be converted into an amino group through a reduction reaction, and then participate in amidation, sulfonation and other reactions to construct a heterocyclic skeleton with antibacterial activity. These compounds may exert their effects by interfering with microbial cell wall synthesis or inhibiting key enzyme activity.
2. Drug synthesis
The synthesis of muscle relaxant fluoroquinolone: 5-nitroindole-3-acetic anhydride (obtained by further nitration of 5-nitroindole-3-acetic acid) is a key intermediate in the synthesis of fluoroquinolone. Fluquinolone was developed by Tanabe Corporation in Japan and first launched in 1983. It is a relaxant with good therapeutic effects on facial and neck muscle spasms. The synthesis route usually starts from indigo carmine anhydride, which is then nitration to obtain 5-nitroindigo carmine anhydride. The key intermediate is then synthesized through reduction, acetylation, and other steps to ultimately produce fluoroquinolone.
Research and development of anti tuberculosis drugs: 5-nitroindigo carmine has potential applications in the research and development of anti tuberculosis drugs. For example, its derivatives may serve as anti tuberculosis agents, exerting therapeutic effects by inhibiting the growth or reproduction of Mycobacterium tuberculosis.
Research and development of anti HIV drugs: 5-nitroindigo carmine and its derivatives have shown potential in the development of anti HIV drugs. Through structural modification, new compounds with anti HIV activity may be developed, providing new options for AIDS treatment.
Antispasmodic drugs: In addition to fluoroquinolone, 5-nitroindigo can also be used to synthesize other antispasmodic drugs, which alleviate muscle spasms by regulating neurotransmitters or ion channels.
Drug architecture
The synthesis of spiro [indole-thiazol-4-one]: 5-nitroindigo is an important intermediate for the synthesis of spiro [indole-thiazol-4-one]. Spiro [indole-thiazol-4-one] is a compound with potential biological activity, which may have antibacterial, antifungal, or anti-tumor activities.
Enzyme inhibitor
Glutamine transferase inhibitors: 5-nitroindigo and its derivatives may serve as glutamine transferase inhibitors for the treatment of diseases associated with abnormal glutamine metabolism.
Acetylcholinesterase inhibitors: Through structural modification, 5-nitroindigo may develop compounds with acetylcholinesterase inhibitory activity for the treatment of neurodegenerative diseases such as Alzheimer's disease.
2. Antimicrobial drugs
5-nitroindigo derivatives have been designed as potential anti tuberculosis agents against pathogens such as Mycobacterium tuberculosis. The nitro and indole rings in its molecular structure can form hydrogen bonds or π - π stacking interactions with target proteins, enhancing the affinity of drugs with pathogens. Through computer-aided drug design (CADD) technology, it is possible to predict its binding mode with key enzymes in mycobacteria and guide structural optimization.
3. Anti spasmodic drugs
5-Nitroindigo carmine is a key intermediate of the muscle relaxant fluoroquinolone. Fluoroquinolone is developed by Tanabe Corporation in Japan and is used to treat facial and neck muscle spasms. The synthesis route uses indigo anhydride as the raw material, which is then nitration to produce 5-nitroindigo anhydride. The key intermediate N - (2-amino-5-acetamidobenzoyl) ortho toluidine is obtained through reduction, acetylation, and other steps, and finally fluoroquinolone is synthesized. The clinical application of this drug has proven its significant therapeutic effect on facial muscle spasms.
4. Human Glutamine Transferase Inhibitors
5-Nitroisatin derivatives have been designed as glutamine transferase inhibitors, which may inhibit the glutamine metabolism pathway in tumor cells, blocking their energy supply and biosynthesis. This type of inhibitor has potential application value in the development of anti-tumor drugs, especially for glutamine dependent tumors.
Insect repellent:
Some 5-nitroindigo derivatives exhibit insecticidal activity, possibly by interfering with the parasitic nervous system or energy metabolism pathways. The nitro and indole rings in its molecular structure can bind to parasitic target proteins, blocking key signaling pathways.
6. Anti HIV drugs
In the development of anti HIV drugs, 5-nitroindigo derivatives are designed as reverse transcriptase inhibitors or integrase inhibitors. Through structural optimization, its targeting and inhibitory activity against HIV virus can be improved, and its toxicity can be reduced.
7. Anti tuberculosis drugs
For the treatment of tuberculosis, 5-nitroindigo derivatives may play a role by inhibiting key enzymes of Mycobacterium tuberculosis or interfering with cell wall synthesis. The nitro and indole rings in its molecular structure can enhance the interaction between drugs and targets, improving antibacterial activity.
8. Acetylcholinesterase inhibitors
5-nitroindigo derivatives have been designed as acetylcholinesterase inhibitors and may be used to treat neurodegenerative diseases such as Alzheimer's disease. These inhibitors improve cognitive function by inhibiting acetylcholinesterase activity, increasing synaptic acetylcholine levels.
9. Potential anti tuberculosis agents
In addition to direct antibacterial activity, 5-nitroindigo derivatives may also exert indirect anti tuberculosis effects by enhancing host immune responses or interfering with virulence factors of Mycobacterium tuberculosis.

Organic Synthesis and Materials Science
1. Spiro [indole-thiazol-4-one] skeleton
5-nitroindigo is an important precursor for constructing complex heterocyclic compounds such as spiro [indole-thiazol-4-one]. This type of skeleton is widely present in natural products and bioactive molecules, with various biological activities such as antibacterial, anti-tumor, anti-inflammatory, etc.
2. Synthesis of heterocyclic compounds
Through strategies such as cyclization reactions and nucleophilic substitution, 5-nitroindigo can be converted into various nitrogen-containing heterocyclic compounds. For example, it can react with amine compounds to produce indole amine derivatives, which have potential biological activity.
3. Dyes and pigments
5-nitroindigo and its derivatives can be used for the synthesis of organic dyes and pigments. The conjugated system in its molecular structure endows it with excellent light absorption properties, making it suitable for fields such as textiles and inks.
4. Fluorescent probe
By introducing fluorescent groups, 5-nitroindigo derivatives can be designed as fluorescent probes for fields such as biological imaging and environmental monitoring. Its fluorescence performance can be regulated through molecular structure modification.
5. Functional materials
5-nitroindigo derivatives have potential applications in the field of functional materials, such as electronic transport materials, nonlinear optical materials, etc. The nitro and indole rings in its molecular structure can provide electron acceptor and donor sites, enhancing the optoelectronic properties of the material.
Biochemistry and Molecular Biology
1. Research on protein-protein interactions
5-nitroindigo derivatives can be used as probe molecules for studying protein-protein interactions. The nitro and indole rings in its molecular structure can form specific binding with the target protein, and the interaction can be detected through techniques such as fluorescence resonance energy transfer (FRET).
2. Enzyme activity inhibition
5-nitroindigo derivatives can be designed as competitive or non competitive inhibitors targeting specific enzyme active sites. This type of inhibitor has significant value in enzymatic research and drug development.

3. Regulation of cellular signaling pathways
By affecting the activity of intracellular signaling molecules, 5-nitroisatin derivatives can regulate processes such as cell proliferation, differentiation, and apoptosis. The nitro and indole rings in its molecular structure can interact with signal molecules and interfere with signal transduction pathways.
Future Prospects
The future of 5-Nitroisatin in organic synthesis and medicinal chemistry looks promising, with ongoing research aimed at expanding its applications and improving its properties. One area of focus is the development of new synthetic methods that are more efficient, sustainable, and cost-effective. By optimizing reaction conditions, using greener solvents, and exploring novel catalysts, researchers hope to increase the yield and purity of 5-Nitroisatin and its derivatives, making them more accessible for large-scale production.
Another area of interest is the design and synthesis of new 5-Nitroisatin derivatives with enhanced biological activities. By introducing specific functional groups or modifying the core structure of 5-Nitroisatin, researchers can create compounds with improved potency, selectivity, and pharmacokinetic properties. These novel derivatives may offer new therapeutic options for the treatment of various diseases, including cancer, infectious diseases, and neurological disorders.
Furthermore, the use of computational chemistry and molecular modeling techniques is expected to play an increasingly important role in the study of 5-Nitroisatin and its derivatives. These tools can help researchers predict the reactivity, stability, and biological activity of new compounds before they are synthesized, thereby accelerating the drug discovery process and reducing the need for extensive experimental screening.
Frequently Asked Questions
Molecular formula and molecular weight of 5-Nitroisatin?
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C₈H₄N₂O₄,分子量192.13 g/mol.
What is the appearance of 5-nitroisatin?
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Bright yellow to orange-yellow crystalline solid.
Solubility of 5-Nitroisatin?
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Sparingly soluble in water, readily soluble in organic solvents (such as ethanol, DMF, chloroform).
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